Coffee with BioHPC : Introducing Redhat 9.4 (RHEL) Upgrades
Join us for a special Coffee with BioHPC session as we dive into the Red Hat Enterprise Linux 9.4 (RHEL 9.4) upgrade. Whether you're a seasoned user or just getting started with BioHPC systems, this is your chance to stay ahead of the curve and get hands-on insights from our in-house experts who will walk you through what’s changing, how it may affect your workflows, and what support you can expect during this migration.
What to Expect:
An Introduction to RHEL 9.4: Get a clear overview of Red Hat Enterprise Linux 9.4 and how it compares to the current RHEL 7.9 environment.
Transition Insights: Learn what the upgrade process will look like, including changes users can expect and how to prepare.
Early Access via Test Nodes: Explore how you can start experimenting with RHEL 9.4 now through our open test cluster.
Rollout Timeline: Find out when the full migration will happen — and what’s planned for the Fall semester.
Don’t miss this opportunity to ask questions, share feedback, and connect with the BioHPC team over coffee and conversation!
Event details
Date : 25th June, 2025
Time : 10:30am to 12:00pm
Speakers : Liqiang Wang and Abash Sharma
Location : ND11.218 and Online via Microsoft Teams

Coffee with BioHPC: Decoding the Sequence Basis of Genome Regulation
Coffee with BioHPC session featuring Dr. Jian Zhou, Assistant Professor and Lupe Murchison Foundation Scholar in Medical Research, Department of Bioinformatics.
In this session, Dr. Zhou will explore the latest research and methodologies his lab uses to understand how DNA sequence patterns influence gene regulation. His work combines deep learning, computational biology, and genomics to uncover the sequence-level rules underlying gene expression and chromatin organization—crucial insights for disease biology and precision medicine.
Event Details:
Speaker: Dr. Jian Zhou
Date & Time: Wednesday, May 28, 2025, at 10:30 AM
Location: ND11.218 or join online via Microsoft Teams

Coffee with BioHPC - Real-World AI Deployment: Challenges and Solutions from the BioHPC Chatbot
Topic: Real-World AI Deployment: Challenges and Solutions from the BioHPC Chatbot
Speakers: Dr. Chinthak Murali and Yunhui Fu
Date & Time: Wednesday, April 23, 2025, at 10:30 AM
Location: ND11.218 or join online via Microsoft Teams

Coffee with BioHPC - Integrating AlphaFold3 for Advanced Biomolecular Research
Topic: Integrating Alphafold3 with Astrocyte for Advanced Biomolecular Research
Speaker : Dr. Xin Yang
Date & Time: Wednesday, March 26, 2025, at 10:30 AM
Location: ND11.218 or join online via Microsoft Teams
Coffee with BioHPC - Lab Data Management: A User Perspective
Topic: Lab Data Management: A User Perspective
Speaker : Dr. Gaudenz Danuser
Date & Time: Wednesday, January 29, 2025, at 10:30 AM
Location: ND11.218 or join online via Microsoft Teams

Coffee with BioHPC -Optimizing BioHPC resources, GPUs and managing costs
Topic: Managing BioHPC resources
Speaker: Gaudenz Danuser, Liqiang Wang
Date & Time: Wednesday, November 20th, 2024, 10:30 AM - 12:00 PM
Location: ND.11.218 and Microsoft Teams
Coffee with BioHPC - Upgrading to RHEL8: Enhancing Security and Performance for BioHPC
Topic: Upgrading to RHEL8: Enhancing Security and Performance for BioHPC
Speaker: Liqiang Wang
Date & Time: Wednesday, September 25th, 2024, 10:30 AM - 12:00 PM
Location: G9.102 (In person) and Microsoft Teams
CryoEM Resources on the BioHPC Platform.
Topics and Speakers:
An Introduction to Modern CryoEM: Data Collection is Only the Beginning!
Speaker: Daniel Stoddard
CryoEM Data Transfer and Storage on BioHPC
Speaker: Hung Le
BioHPC Collaboration on Structural Biology
Speaker: Abash Sharma
SBGrid on BioHPC
Speaker: Suresh Pannerselvam

Coffee with BioHPC : Workflows in Astrocyte
Topic : Introduction to Single Cell Analysis Workflows
Speaker : John Lafin, PhD
Topic: ATAC-seq Workflow Development
Speakers : Achisha Saikia, M.S. , Felix Perez , M.S.


Coffee with BioHPC
Explore Generative AI, Astrocyte's VizApp, Ray, and More!
Presenter: BioHPC team

Coffee with BioHPC
Exploring flywheel.io for Radiology Research and AI
Speaker: Matthew Lewis, PhD
Assistant Professor
Radiology

Coffee with BioHPC
Deploying Large Language Models in the Wild
Speaker: Andrew Jamieson, PhD
Assistant Professor
Lyda Hill Department of Bioinformatics